Revolutionizing Protein Design: How AI is Building New Life Molecules

The Story Begins: A 4 Billion Year Dialogue In the 2025 re-edition of “Cybernetics and Scientific Methodology” by Guangdong People’s Publishing House, the authors Jin Guantao and Hua Guofan highlighted a prescient warning on the opening page: “The cognitive chaos of artificial intelligence stems from the ideology of cybernetics itself.” This 40-year-old quote gained new relevance on October 15, 2025, with the publication of a paper titled “Odyssey” on arXiv (arXiv:2509.22611v1). When chopping vegetables in the kitchen, humans intuitively cut tomatoes into cubes rather than triangles – this “intuitive physics” allows us to navigate complex environments effortlessly. But for designing …